Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950265.1_cds_XP_016490817.1_81199
CDS Infomation

[gene=LOC107810537] [db_xref=GeneID:107810537] [protein=protein SCAI-like] [protein_id=XP_016490817.1] [location=join(8334..8822,11452..11658,11741..11983,12458..12524,12622..12813,13288..13379,14436..14615,14693..14829,14932..15112)] [gbkey=CDS]
Sequence

ATGGCAGACGACGTAGTACCGAAGACATTTAGAGCGTTAGTAGAAAGTGCTGAGAAGAAG
TACGCCAGAGTACGGGATTTGCCGGCGTACGGACGGTGGGGAACGAGCAACCACTACTTT
CACAAGGTGTTTAAAGCGTATATGAGGTTATGGAAGTACCAGCAGGAGAATCGAGCGAAG
CTAACGGAGTGCGGTTTACAGCGATGGGAGATCGGCGAGATCGCTTCGAGAATCGGTCAG
CTTTACTTTACGCAGTACATGAGGACTAGCGAAGTTAGGTTTTTACTCGAATCGTATATT
TTTTACGAAGCGATTTTGCACAGGAAGTATTTCGAAGGTTCTGGGAAAGAACGAATGGTG
AGGTTTAAAGAGCTGAGGTTCTATGCTAGGTTTTTAATGGTTTCGTTGATTTTAAATCGA
TCGGAAATGGTGAAACTGCTTATGGAACAATTTAAAGCTATTGTTGATGACAGTAGAGCT
GCTTTTCCGGGTACTAACTTCAAAGAGTGGAGACTGGTGGTGCAAGAAATTGTTAGGTTT
ACAAGAGTTGATTCTCCATCTCCAGATGCCAGGCCTCTACGATATTGTGCTCTCTTTGAT
TCACATCCGTCATCTCGTCCATATGTAGCTCGCTTCCATGCTAAGAAGGTGCTAAAATTT
CGAGATGCACTTCTGACAAGTTATCACAAAAGTGAGGTCAAATTTGCAGAATTAACACTG
GACACTTACAGAATGCTGCAATGTTTGGAATGGGAACCCAGTGGATCTTTCTACCAAAGA
AGTCCAGTTGAACCACGAGAGAATGGTGCTGTTACTGACCAATCTGTAACTTCTGGACTG
ATAGATATAAACTTGGCTGCTGAGATGATGGATCCAGCTTTGCCTCCAAATCCCAAGAAG
GCTGTTCTTTACCGTCCTTCTGTTCCGCTATTGATATCTGTCATCGCTACAATGTGTGAG
GAGCTTCCTCCAGAGAGTGTGGTATTAATATATATTTCTGCATCAGGAAATACAAATCCC
AGTACCGCCTCTCACACGGAAAGCTCTTCAAGTTCTAGAAAATCTTCAAAGAACATTGCT
CTTTCTCGTACTTCTTATGAACAGAAGGGCGCTTTACATGAAAATTATATCAACACCAAT
GGAGATACGGGTCAATATTTTGAGAATTGTTTGTGCTTAGGTCCTAGCAGAAGTGGAGGT
TCAAATAACCTCTATCCAGGAGATCTAATTCCTTTCACACGAAGACCTCTATTCCTGATA
ATTGATAGTGACAACAGCCATGCATTCAAGGTTCTACATGGGGCAGAAAGAGGAGAAAAA
AGTGCTCTATTTCTCTCTCCCCTGAGGCCATCATTCAAGAATTCAGGTACTGATGTAACA
CAATCTGGAAGTCAGTTCACCTTGTTCTTGGCTGCTCCCTTACAGGCCTTCTGCCAGTTG
GTTGGCCTTGTCTCTTCTGATAAGGATATGGATTGTGCTGATGAGGCTGATGGCATCATC
TCAACTGCATTTGCAGAGTGGGAAGTAAACCTCTGTACATCGACTAGCCTAGATTTGGTT
TGGGCTCAAGTTCTTTCTGATCCATTTCTGAGACGGCTTATTCTCAGATTCATATTCTGC
CGTGCTGTGCTCGCTCTATTTTGCTTGCAGGAACGTGAAGATCAGTATTTGCCTGCTTGT
CTACCAAAGCTTCCTGATACATTCTCACCAAACTCTGAAACTGTGCAATCAGCTATCAGA
CGACTTGCAAAGCTTCTACAAGTTTCAGATTGTTTTCGATTTGAATAA

Peptide Sequence

PEP ID

XP_016490817.1
PEP Infomation

PREDICTED: protein SCAI-like [Nicotiana tabacum]
Sequence

MADDVVPKTFRALVESAEKKYARVRDLPAYGRWGTSNHYFHKVFKAYMRLWKYQQENRAK
LTECGLQRWEIGEIASRIGQLYFTQYMRTSEVRFLLESYIFYEAILHRKYFEGSGKERMV
RFKELRFYARFLMVSLILNRSEMVKLLMEQFKAIVDDSRAAFPGTNFKEWRLVVQEIVRF
TRVDSPSPDARPLRYCALFDSHPSSRPYVARFHAKKVLKFRDALLTSYHKSEVKFAELTL
DTYRMLQCLEWEPSGSFYQRSPVEPRENGAVTDQSVTSGLIDINLAAEMMDPALPPNPKK
AVLYRPSVPLLISVIATMCEELPPESVVLIYISASGNTNPSTASHTESSSSSRKSSKNIA
LSRTSYEQKGALHENYINTNGDTGQYFENCLCLGPSRSGGSNNLYPGDLIPFTRRPLFLI
IDSDNSHAFKVLHGAERGEKSALFLSPLRPSFKNSGTDVTQSGSQFTLFLAAPLQAFCQL
VGLVSSDKDMDCADEADGIISTAFAEWEVNLCTSTSLDLVWAQVLSDPFLRRLILRFIFC
RAVLALFCLQEREDQYLPACLPKLPDTFSPNSETVQSAIRRLAKLLQVSDCFRFE

Transcript Sequence

Gene sequence data has not been registered.